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J Biosci ; 2005 Dec; 30(5): 699-709
Article in English | IMSEAR | ID: sea-111184

ABSTRACT

We analyse forty-seven chloroplast genes of the large subunit of RuBisCO, from the algal order Ectocarpales, sourced from GenBank. Codon-usage weighted by the nucleotide base-bias defines our score called the codon-impact-parameter. This score is used to obtain phylogenetic relations amongst the 47 Ectocarpales. We compare our classification with the ones done earlier.


Subject(s)
Phaeophyceae/classification , Base Composition/genetics , Chloroplasts/genetics , Codon/genetics , Data Interpretation, Statistical , Genetic Variation/genetics , Phylogeny , Ribulose-Bisphosphate Carboxylase/genetics , Sequence Analysis, DNA , Species Specificity
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